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The clutch hub splines look good to me. The shaft splines appear to show some wear but it is hard to tell how much of a notch is there. An almost end view would tell me more.
If these parts came out of the same bike my guess is that is not the original clutch hub that mated with that shaft but as I said, from the picture of the shaft I can't draw hard conclusions.
Try and measure it before you disassemble it. It might tell you something. Then remeasure after you reassemble with what ever parts you choose.
... Oh yeah, I forgot, you said he was an engineer....