Let me start with some history. I broke down last summer, the bike started misfiring,and then stopped. it was the HES. Got it replaced and it ran fine for a few miles. Then started misfiring again. It was thought to be water in the gas. I rode for 2200, each tank of gas it got better and I was able to run the tank almost dry.
I have since changed the fuel filter and cleaned the tank. I left for Bike week in the cold (13). It ran fine until it warmed up around (55). Which was over500 miles. Then a few misses. Continued getting worse, would run awhile when cold. I decide that I did not need to break down in the boonies so I headed home. It kept getting worse, almost all the time.
I stopped in a rest area to let it cool off . I also for some reason decided to pull all the relays in the fuse box. 800 miles later it still has not missed once and actually started a bit easier.
Any ideas? I want to fix this and don't know what to do. I think it it an electric problem.